Diabetes 52:2888-2895, 2003 © 2003 by the American Diabetes Association, Inc. A Mammalian Protein Homologous to Fructosamine-3-Kinase Is a Ketosamine-3-Kinase Acting on Psicosamines and Ribulosamines but not on Fructosamines
1 Laboratory of Physiological Chemistry, ICP, and Université Catholique de Louvain, Brussels, Belgium
Fructosamine-3-kinase (FN3K) is an enzyme that appears to be responsible for the removal of fructosamines from proteins. In this study, we report the sequence of human and mouse cDNAs encoding proteins sharing 65% sequence identity with FN3K. The genes encoding FN3K and FN3K-related protein (FN3K-RP) are present next to each other on human chromosome 17q25, and they both have a similar 6-exon structure. Northern blots of mouse tissues RNAs indicate a high level of expression of both genes in bone marrow, brain, kidneys, and spleen. Human FN3K-RP was transfected in human embryonic kidney (HEK) cells, and the expressed protein was partially purified by chromatography on Blue Sepharose. Unlike FN3K, FN3K-RP did not phosphorylate fructoselysine, 1-deoxy-1-morpholino-fructose, or lysozyme glycated with glucose. In a more systematic screening for potential substrates for FN3K-RP, we found, however, that both enzymes phosphorylated ketosamines with a D-configuration in C3 (psicoselysine, 1-deoxy-1-morpholino-psicose, 1-deoxy-1-morpholino-ribulose, lysozyme glycated with allosethe C3 epimer of glucose, or with ribose). Tandem mass spectrometry and nuclear magnetic resonance analysis of the product of phosphorylation of 1-deoxy-1-morpholino-psicose by FN3K-RP indicated that this enzyme phosphorylates the third carbon of the sugar moiety. These results indicate that FN3K-RP is a ketosamine-3-kinase (ketosamine-3-kinase 2). This enzyme presumably plays a role in freeing proteins from ribulosamines or psicosamines, which might arise in a several step process, from the reaction of amines with glucose and/or glycolytic intermediates. This role is shared by fructosamine-3-kinase (ketosamine-3-kinase 1), which has, in addition, the unique capacity to phosphorylate fructosamines.
Primary amines of proteins and other compounds spontaneously react with carbohydrates that possess a free carbonyl group to produce Schiff bases. These slowly rearrange to form Amadori or Heyns products, depending on whether the reacting sugar was an aldose or a ketose (14). This process, known as nonenzymatic glycation, is best known for glucose, leading then to the production of fructosamines. Similar reactions occur with other sugars (mannose, galactose, fructose, and pentoses) (5) and phosphorylated sugar derivatives (68). In fact, glucose is intrinsically one of the least reactive sugars in this respect because it is well stabilized in its hemiacetalic form (5). Formation of fructosamines has attracted much attention in the context of diabetes. This is because the glycation rate is first order with respect to glucose concentration. Serum fructosamines and glycated hemoglobin are therefore assayed to assess the blood glucose concentration in the preceding weeks or months (911). Furthermore, fructosamines are thought to participate in the pathogenesis of long-term diabetes complications by acting either as such (12) or after conversion to advanced glycation end products (1315). The sequence of a mammalian protein that catalyzes the phosphorylation of low-molecular weight and protein-bound intracellular fructosamines on the third carbon of their deoxyfructose moiety has recently been reported (16,17). Because fructosamine 3-phosphate residues are unstable (17), fructosamine-3-kinase (FN3K) appears to cause the removal of fructosamine residues from proteins. Accordingly, 1-deoxy-1-morpholino-fructose, a (substrate and) competitive inhibitor of FN3K, caused a twofold increase in the accumulation of glycated hemoglobin in erythrocytes incubated with 200 mmol/l glucose (18). While cloning the cDNA encoding FN3K, we noted the existence of human and mouse cDNAs encoding a related protein. In this study, we report the sequence of this FN3K-related protein (FN3K-RP) and the identification of its biochemical function.
Preparation of ketosamines. Psicoselysine was synthesized from allose and t-BOC-lysine and purified as previously described for fructoselysine (18,19). 1-Deoxy-1-morpholino-psicose, 1-deoxy-1-morpholino-ribulose, and 1-deoxy-1-morpholino-xylulose were synthesized from morpholine and allose, ribose, or xylose, respectively (20). The incubation time after the addition of ethanol was reduced to 15 min in the last two cases. The products were purified on AG50WX4 (H+ form) columns from which they were eluted with 500 mmol/l NaCl. They were desalted by gel filtration on Biogel P2 and quantified by measuring the reducing power (21), using 1-deoxy-1-morpholino-fructose as a standard. Mass spectrometry analysis indicated that the products had the expected m/z ratio. Their purity was checked by paper chromatography on 3 MM paper in two different solvents (ethylacetate/pyridine/water: 12/5/4 and ethylacetate/water/acetic acid/formic acid: 18/4/3/1) and estimated to >95% for psicoselysine, 1-deoxy-1-morpholino-psicose, and 1-deoxy-1-morpholino-xylulose, and to 70% for 1-deoxy-1-morpholino-ribulose. Using this method, we could ascertain that psicoselysine and 1-deoxy-1-morpholino-psicose were not contaminated with their C3 epimers, which had distinct Rfs. 1-Deoxy-1-morpholinoribulose appeared to be contaminated with 20% 1-deoxy-1-morpholinoxylulose.
[14C]1-deoxy-1-morpholino-ribulose was synthesized by incubating 12.5 µCi [1-14C]ribose (American Radiochemical) with 30 µl morpholine at 75°C; 8 µl acetic acid and 40 µl ethanol were added after 30 and 40 min, respectively, and the incubation pursued for 15 min. Further purification on the cation exchanger (see above) resulted in a product that could be phosphorylated by FN3K or FN3K-RP to an extent of For the synthesis of glycated lysozyme, a solution containing 60 mg/ml hen egg lysozyme, 25 mmol/l HEPES, pH 7.1, and 1 mol/l of the indicated aldoses was filtered on a 0.22-µm membrane and incubated at 37°C for 20 days (allose and glucose) or 3 days (ribose). Glycated lysozyme was purified by gel filtration on a Biogel P2 column equilibrated with water. The degree of glycation, estimated by nanoelectrospray mass spectrometry, was 1.35 mol/mol for glucose, 3.35 for allose, and 4 for ribose, which is consistent with the higher reactivity of allose, and most particularly of ribose, as compared with glucose (5).
Sequencing and preparation of expression vectors.
Overexpression and purification of proteins.
The supernatant obtained from For the Western blots, proteins were separated in 10% SDS-polyacrylamide gels, transferred onto nitrocellulose membranes, and probed with rabbit polyclonal antibodies directed against recombinant human FN3K at a 1/1,000 dilution and then with horseradish peroxidase-conjugated anti-rabbit IgG (Sigma) at a 1/2,000 dilution. Immunocomplexes were visualized with the enhanced chemiluminescence reaction (Amersham Pharmacia Biotech). The amount of FN3K-RP and FN3K was estimated by comparing the intensity of bands corresponding to these proteins in Coomassie Blue-stained SDS-PAGE gels with those of protein standards.
RNA extraction and Northern blotting.
Measurement of enzymatic activity.
Preparation of phosphorylated 1-deoxy-1-morpholino-psicose for nuclear magnetic resonance and mass spectrometry analysis. Mass spectrometry analysis was carried out as previously described (26). For the nuclear magnetic resonance (NMR) analysis, the preparation of 1-deoxy-1-morpholino-psicose-phosphate was evaporated to dryness, and the residue was dissolved in deuterated water. The pH of the final solution was 6.0. All NMR spectra were acquired on a Bruker DRX500 spectrometer at 30°C using a 5-mm probe head for inversion detection. Standard Bruker pulse programs were used to obtain one-dimensional phosphorus spectra (with and without proton decoupling), proton spectra (with and without phosphorus decoupling), 1H-1H correlation spectra (COSY), and 1H-31P-spectra (heteronuclear multiple bond connectivity [HMBC]). A delay of 50 ms was used for evolution of 3JPH constants. 31P chemical shifts were referenced to external 85% H3PO4 and proton chemical shifts and to 3-(trimethylsilyl)propanesulfonic acid (sodium salt).
Identification of cDNA encoding FN3K-RP. Basic local alignment search tool searches with the sequence of FN3K allowed us to identify several human ESTs and one mouse EST that encoded proteins homologous to FN3K. Human cDNAs (clones 1865439 and 1860099, corresponding to sequences AI244490 and AI202129) were ordered and completely sequenced to establish the primary structure of FN3K-RP. Both encoded the same 309 residue protein (identical to hypothetical protein FLJ12171, accession no. AAH07611) with a predicted mass of 34,412 Da and both had a 5' untranslated region of 17 nucleotides. They differed from each other through their 3' untranslated region, of 812 and 735 bp, respectively, and by two single nucleotide changes at positions 1433 and 1555.
The mouse cDNA sequence encoding FN3K-RP was established by 5' and 3' RACE experiments starting from EST sequence AI647859, which contains nucleotides 445646 of the final cDNA sequence. The sequence that we obtained contained 48 bp of the 5' untranslated region and 78 bp of the 3' untranslated region (whose length is The predicted human and mouse FN3K-RPs have the same length (309 amino acids) as human and mouse FN3Ks (Fig. 1). They share 88% sequence identity with each other and 64% sequence identity with human and mouse FN3Ks. Like FN3Ks, their second amino acid is a glutamate, which suggests that their NH2-terminal residue is an acetylated methionine (27), as is the case for FN3K (16). They are homologous to bacterial proteins of unknown function, with which they share 2535% sequence identity (not shown). Like FN3K (16), FN3K-RP comprises an HGDxxxxN motif also found in aminoglycoside kinases.
Gene structure and chromosomal localization of FN3K and FN3K-RP. Basic local alignment search tool searches with the human genome sequences indicate that FN3K-RP is located in the telomeric region of the long arm of chromosome 17, next to the gene encoding FN3K (not shown). Both genes are separated by 8.5 kb and have the same orientation, the gene encoding FN3K-RP being 5' with respect to the FN3K gene. They both have the same 6-exon structure, with the initiator ATG in exon 1 and the stop codon in exon 6. Their intron-exon junctions are in homologous position, and they both comprise a large fourth intron (7.5 kb in FN3K; 3.5 kb in FN3K-RP). Two FN3K pseudogene fragments were identified on chromosome 22. One corresponds to exon 2 flanked by parts of introns 1 and 2 and the other to exon 3, intron 3, and exon 4, with adjacent parts of introns 2 and 4. They both share >95% identity with the human FN3K gene, indicating recent duplication events of portions of the FN3K gene. As Szwergold, Howell, and Beisswenger (17) reported the localization of the FN3K gene on chromosome 1, we checked the chromosomal localization by fluorescence in-situ hybridization (FISH). For this, a PAC clone containing the FN3K gene (no. 127J18) was identified on human RPCI-1 PAC filters (28) by hybridization of a human FN3K probe. PCR amplification of introns using exonic primers showed that this clone contained both FN3K and FN3K-RP genes (not shown). FISH analysis indicated that it hybridized with the telomeric region of chromosome 17 (Fig. 2). No signal was detected on chromosome 1.
Tissular distribution of FN3K and FN3K-RP. Northern blots (Fig. 3) showed that the mouse FN3K mRNA is about 1.1 kb in length, which is in agreement with the published sequence (16), whereas the FN3K-RP mRNA is much longer, indicating the presence of an 2 kb 3' untranslated region. Both mRNAs show the highest levels of expression in bone marrow, brain, spleen, kidney, and lens (allowing for the lower amount of RNA loaded onto the gels in the latter case). Specific expression of FN3K-RP was also observed in testis, thymus, and lungs. Both FN3K and FN3K-RP are also expressed at lower levels in heart, liver, and skeletal muscle. No expression was observed in the intestinal mucosa.
Overexpression and partial purification of FN3K-RP. Attempts were made to express both human and mouse FN3K-RPs in E. coli using pET3a as a vector and E. coli BL21pLysS as host cells. In the case of mouse FN3K-RP, SDS-PAGE analysis indicated that an insoluble protein with the expected mass ( 34 kDa) was obtained. This protein cross-reacted with rabbit polyclonal antibodies raised against human FN3K, with an approximately threefold lower reactivity than human FN3K (not shown). No expression of human FN3K-RP could be detected.
We therefore resorted to expression in eukaryotic cells. Extracts of HEK cells that had been transfected with plasmids driving the expression of human FN3K or human FN3K-RP were chromatographed on Blue Sepharose, which is known to strongly retain FN3K (16). Proteins were eluted from the column with a salt gradient. Analysis of the fractions by Western blotting with anti-FN3K antibodies indicated the presence of FN3K in the fractions eluted with a high salt concentration from the column loaded with the extracts of cells expressing human FN3K (Fig. 4A). A protein eluting with lower salt concentrations was detected with the same antibodies in the fractions of the column loaded with FN3K-RP (Fig. 4B). None of these proteins could be detected in fractions of a column on which an extract of cells transfected with a control plasmid had been loaded (not shown). These results indicated that soluble FN3K-RP was expressed in HEK cells and that this protein had a distinct chromatographic behavior as compared with FN3K. Coomassie Blue staining of SDS-PAGE gels indicated that this protein accounted for
Enzymatic activity of FN3K-RP. As shown in Fig. 4A, overexpressed FN3K catalyzed the phosphorylation of protein-bound fructosamines, whereas no such activity was observed with FN3K-RP. We therefore undertook a more systematic screening of ketosamines as potential substrates of FN3K-RP (and of FN3K) and found that both enzymes catalyzed the phosphorylation of proteins that had been glycated with allose and which therefore contained "psicosamines." In the case of FN3K, the kinase activity observed was about 1.6-fold higher with D-allose-glycated lysozyme than with glucose-glycated lysozyme, but this is presumably due to the higher glycation extent observed in the former than in the latter case (3.3 vs. 1.3 mol/mol). Both proteins were also found to phosphorylate lysozyme that had been glycated with D-ribose (results not shown).
These findings prompted us to study the phosphorylation of low-molecular weight psicosamines and ribulosamines. Both FN3K and FN3K-RP were found to phosphorylate 1-deoxy-1-morpholino-psicose, psicoselysine, and 1-deoxy-1-morpholino-ribulose, but only FN3K phosphorylated 1-deoxy-1-morpholino-fructose (Table 1) and fructoselysine (not shown). With both enzymes, the KM values for the model ribulosamine were 40- to 80-fold lower than for the low-molecular weight psicosamines, but only about 3- to 4-fold lower than the KM for 1-deoxy-1-morpholino-fructose in the case of FN3K. Furthermore, the latter enzyme displayed an
We also tested the ability of the low-molecular weight ketosamines to inhibit the phosphorylation of lysozyme glycated with allose or with ribose. When the substrate was lysozyme glycated with allose, FN3K was inhibited with all four investigated compounds, including 1-deoxy-1-morpholino-fructose, whereas FN3K-RP was inhibited by only the two psicosamines and the ribulosamine without effect of the fructosamine. 1-Deoxy-1-morpholino-tagatose (the C4 epimer of 1-deoxy-1-morpholino-fructose) was a very weak inhibitor of FN3K-RP (I50 >5 mmol/l), whereas it inhibited FN3K with an I50 of 0.25 mmol/l (not shown). 1-Deoxy-1-morpholinoxylulose was much poorer as an inhibitor of FN3K and FN3K-RP (I50 350 µmol/l) than 1-deoxy-1-morpholino-ribulose, indicating that the effect of the latter was not due to contamination by the C3 epimer (see RESEARCH DESIGN AND METHODS). Both FN3K and FN3K-RP were poorly sensitive to the low-molecular weight psicosamines and ribulosamine when the phosphorylation of lysozyme glycated with ribose was investigated, probably due to the high affinity of both enzymes for protein-bound ribulosamines.
Identification of the phosphorylated carbon.
Four doublet resonances were detected in the phosphomonoester region of the proton-coupled 31P-NMR spectrum of the sample (ordinate of Fig. 6) and assigned to the four configurational forms of the phosphorylated sugar. The relative abundances were 1:1:1.7:1.2, and the chemical shifts at pH 6.0 were 5.56, 3.97, 3.92, and 3.64 ppm, respectively. 1H-NMR spectra with (not shown) and without (abscissa of Fig. 6) phosphorus broadband decoupling, as well as 1H-31P-HMBC spectra (Fig. 6), were acquired to identify the proton resonances that were coupled to phosphorus. In order to determine which proton in the psicose moiety was coupled to phosphorus, proton-proton COSY were acquired. The assignment of protons bound to position 3 followed from the observation that the corresponding resonances correlated only with one other resonance in COSY. This conclusion was corroborated by the observation that the proton multiplets in the 1H-spectrum collapsed to doublet resonances when phosphorus decoupling was applied (not shown).
Enzymatic activity of FN3K-RP and FN3K. The new enzyme that we describe in the present study phosphorylates psicosamines and ribulosamines, though not fructosamines. The phosphorylated carbon could be identified as C3 by analysis of the phosphorylation product of 1-deoxy-1-morpholino-psicose by both mass spectrometry and NMR spectroscopy. It is most likely that the same carbon is phosphorylated in other substrates, particularly because the homologous enzyme FN3K also phosphorylates the third carbon of the sugar portion of its substrates. FN3K-RP therefore appears to be a ketosamine-3-kinase with a distinct substrate specificity as compared with FN3K. Another new finding reported in the present article is that FN3K has a much broader substrate specificity than previously thought because it acts not only on fructosamines but also on other ketosamines, with comparable (ribulosamines) or significantly lower affinities (psicosamines and maybe also tagatosamines, which were found to act as inhibitors) than it displays for fructosamines. This enzyme is therefore also a ketosamine- 3-kinase. It is, however, the only enzyme that acts on fructosamines, which are probably quantitatively the most important ketosamines that are formed under physiological conditions. Furthermore, it displays a higher catalytic efficiency (Vmax/KM ratio) on a model fructosamine (1-deoxy-1-morpholino-fructose) than on the equivalent ribulosamine (1-deoxy-1-morpholino-ribulose). Therefore, its name "fructosamine-3-kinase" appears justified, although its designation as "ketosamine-3-kinase 1" and that of FN3K-RP as "ketosamine-3-kinase 2" would be more rigorous. For the sake of clarity, the names FN3K and FN3K-RP will be used in the rest of the DISCUSSION.
Chromosomal localization and tissular distribution. Previous RT-PCR experiments performed on human RNAs indicated a widespread tissular distribution of FN3K, with particularly high levels in kidney (17). The Northern blots performed on mouse tissues in the present study indicate a wide variability of expression level from tissue to tissue. The most intense signals were observed with RNA from bone marrow, brain, and kidney, whereas other organs such as liver, intestinal mucosa, testis, thymus, and lung have no or barely detectable mRNA. It is not known at present if this difference in tissular distribution is due to a species difference or to a difference in the technique that was used.
Physiological function. As all ketosamine 3-phosphates other than fructosamine 3-phosphates are most likely also unstable, FN3K-RP could also potentially play the role of a deglycating enzyme. The most puzzling question is that of the identity of the substrates upon which this enzyme is acting physiologically. Its best in vitro substrates are two compounds with a hydroxyl group in the D configuration on C3 (D-ribulosamines and D-psicoamines), whereas it displays little if any affinity for ketosamines with an L configuration in C3. Fructosamines are indeed neither substrates nor inhibitors of FN3K-RP, and a tagatosamine and a xylulosamine were found to be poor inhibitors of this enzyme. The question then is to know if and how these substrates could arise in vivo. As allose is not a physiological sugar, it cannot be a source of psicosamines. These could, however, arise through epimerization of fructosamines or of an intermediate in the formation of Amadori products from glucose (Fig. 7). Preliminary data indicate that when proteins are incubated with elevated concentrations of glucose in the presence of 200 mmol/l inorganic phosphate, which facilitates the formation of fructosamines (32), a substrate of FN3K-RP forms (F.C., E.V.S., unpublished data), suggesting that epimerization around the third carbon of fructosamines takes place under these conditions.
Ribulosamines could hypothetically form either directly through reaction of amines with D-ribose or indirectly through reaction with ribose 5-phosphate (Fig. 7) or ADP-ribose, followed by (enzymatic?) removal of phosphate or ADP. Little is known about the concentration of free ribose, ribose 5-phosphate, and ADP-ribose in most cell types. It is, however, worth mentioning that the latter two are extremely powerful glycating agents (7,8) and that it would therefore make sense to have an enzymatic system able to remove the corresponding Amadori products from proteins. As hyperglycemia stimulates the activity of the pentose phosphate pathway (33), poor glycemic control could also favor glycation by ribose 5-phosphate, further linking the new enzyme with diabetes. Further evidence for a role of the new enzyme in combating glucose-induced glycation is to be found in the observation that the incubation of erythrocytes with an elevated glucose concentration under the conditions previously described (18) leads to the formation of substrates not only for FN3K but also FN3K-RP (G.D., F.C., J. Fortpied, and E.V.S., unpublished data). The identity of the FN3K-RP substrates formed under these conditions still remains to be determined; psicosamines and ribulosamines are both likely candidates. Compared with FN3K-RP, FN3K has the unique capacity to phosphorylate fructosamines, suggesting that one of its important functions is to repair damages provoked by glucose. As both ketosamine-3-kinases phosphorylate psicosamines and ribulosamines with similar affinities, one may wonder if FN3K-RP has any specific role to play. One possibility is that this enzyme is able to phosphorylate as yet unknown substrates that are not utilizable by FN3K. In addition, it should be stressed that FN3K-RP appears to be expressed in tissues (testis and lung) where the FN3K mRNA is undetectable. In conclusion, the data reported in the present article indicate the existence of an enzyme that may complement the action of FN3K in a putative deglycation process.
This work was supported by the Concerted Research Action Program of the Communauté Française de Belgique; the Belgian Federal Service for Scientific, Technical, and Cultural Affairs; the European Foundation for the Study of Diabetes; and a grant from the European Community (Euroglycan network, QLG1-CT-2000-00047). F.C. is a fellow of the Fonds pour lEncouragement à la Recherche dans lIndustrie et dans lAgriculture, and G.D. is a Chargé de Recherche of the Belgian Fonds National de la Recherche Scientifique. The authors thank Geneviève Berghenouse for her help in experimental work, Helena Santos (Lisbon) for running and interpreting the NMR spectra, Didier Vertommen for his help in mass spectrometry analysis, and Maria Veiga-da-Cunha for her thoughtful comments. GenBank accession nos.: AY360465, human fructosamine-3-kinase-related protein (human FN3K-RP); AY360466, mouse fructosamine-3-kinase-related protein (mouse FN3K-RP). Address correspondence and reprint requests to E. Van Schaftingen, Avenue Hippocrate 75, B-1200, Brussels, Belgium. E-mail: vanschaftingen{at}bchm.ucl.ac.be Received for publication March 10, 2003 and accepted in revised form September 15, 2003
Abbreviations: COSY, correlation spectra; EST, expressed sequence tag; FISH, fluorescence in-situ hybridization; FN3K, fructosamine-3-kinase; FN3K-RP, FN3K-related protein; HEK, human embryonic kidney; HMBC, heteronuclear multiple bond connectivity; NMR, nuclear magnetic resonance; RACE, rapid amplification of complementary DNA ends
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