Fine-Mapping Gene-by-Diet Interactions on Chromosome 13 in a LG/J × SM/J Murine Model of Obesity

TABLE 3

Positional candidate genes located between D13Mit1 and D13Mit134

Gene Start Stop
D13Mit1 (D13Mit1 + 0 cM) 6,217,175
D13Mit302 (D13Mit1 + 3.00 cM) 6,344,138
Pitrm1 6,360,469 6,392,544
Pfkp 6,392,256 6,460,617
Tubb2 6,649,117 6,651,880
D13Mit80 (D13Mit1 + 3.25 cM) 8,858,870
3110035P10Rik 8,905,602 8,971,735
Idi1 8,986,339 8,991,445
4833405L16Rik 9,075,125 9,081,660
4833405L16Rik 9,137,528 9,145,600
Gtpbp4 9,157,124 9,180,677
AI256361 9,278,546 9,355,769
NM_172459 9,796,143 9,851,686
2900024P20Rik 9,853,202 9,854,579
2210402G22Rik 9,920,581 10,000,960
Chrm3 10,116,058 10,117,827
D13Mit134 (D13Mit1 + 5.25 cM) 12,165,106
  • All information presented in this table is from Build 32 (1 April 2004) Ensembl database (www.ensembl.org). Microsatellite markers used in fine mapping are indicated in bold italics, with the distance from D13Mit1 shown in F2 cM immediately below. Genes and putative genes are indicated in italics. While the 5% confidence region for the interaction effects shown in Fig. 1 lies between D13Mit1 and D13Mit134, the LOD peaks for these effects are closest to D13Mit302.

This Article

  1. Diabetes vol. 54 no. 6 1863-1872