Primer and probe sequences used in this study.
| Primer/probe name | Sequence | Label |
|---|---|---|
| HNF1AFS | 5′ GTC CTA CGT TCA CCA ACA CAG 3′ | none |
| HNF1ARS | 5′ GTG ATG AGC ATA GTC TGC GG 3′ | none |
| Anchor F | 5′ TGT GCC GGT CAT CAA CAG CAT GGG CAG 3′ | 3′ FITC |
| Sensor C | 5′ AGC CTG ACC ACA̅ CTG CAG C 3′ | 5′ LC red-640 3′ phosphate |
| Sensor T | 5′ AGC CTG ACC ACA̅ TTG CAG C 3′ | 5′ LC red-705 3′ phosphate |
The inserted mismatches in the probes Sensor C and Sensor T are underlined, and the site of the cSNP is marked in bold type.