TABLE 2

Haplotype frequencies and evidence for association in F1 + F2 case and control study samples for associated unique SNPs.

rs2144908rs6031552rs2425637rs2425640rs3212183rs1885088Frequency*
ORP value§
AllelesCaseControl
ACTGCA0.0160.0082.110.023
GCTGCA0.0930.0631.510.010
ACGATG0.0360.0261.410.087
ACTGTG0.0310.0241.280.293
ACGGTG0.0140.0111.270.475
GCTGCG0.1420.1221.200.109
ACTGCG0.0810.0711.140.369
GATGTG0.0270.0251.080.732
GCGGTG0.0470.0441.070.715
ACGATA0.0150.0151.010.968
GCTGTG0.0710.0780.910.504
GCGACG0.0100.0110.890.732
GCGATG0.2250.2700.780.013
GAGGTG0.0560.0710.780.131
GATGCG0.0470.0630.730.058
GAGATG0.0390.0540.710.051
  • *

    * Haplotypes with estimated frequencies >1% in case and control subjects and the haplotype containing all associated alleles;

  • risk alleles are shaded;

  • ORs >1 are in boldface;

  • §

    § P values <0.05 are in boldface. F1 + F2, FUSION 1 and 2 samples.