TABLE 2

Location of non-B6–non-DBA regions in BKS

ChromosomeProximal SNP IdentifierProximal SNP locationDistal SNP IdentifierDistal SNP locationLength
1rs62694423,493,529rs370889722,515,30719,021,778*
3mCV2498412587,702,042rs372000798,222,78010,520,738
3rs3671858141,318,437rs3688244149,350,1378,031,700
4rs370143229,303,790rs371445739,214,2529,910,462
4rs365567185,993,583rs6370137129,311,42943,317,846*
5mCV23798232110,754,738rs3663155126,368,83315,614,095*
6rs6239446110,235,439mCV23042866115,587,6475,352,208
8rs369420815,420,149rs369565819,267,7413,847,592
8rs372015048,951,381rs365936656,385,7917,434,410
9rs372256919,342,565rs638585530,308,18710,965,622
9rs365571767,932,226rs367612485,876,37717,944,151*
11rs36597874,406,639rs30886738,400,1033,993,464
11rs370558217,502,025rs370833921,756,0384,254,013
11rs824305551,879,197rs365726658,827,2726,948,075
11rs368871080,124,992rs369744189,124,3778,999,385
13rs3711004111,614,693mCV24397011121,083,6419,468,948*
15rs635433077,377,173rs3686133104,469,41427,092,241
16mCV2308351492,259,824rs625414599,700,9547,441,130
19rs625437126,463,268rs622490030,231,4033,768,135
Total length223,925,993
Percent of genome (% of 2.6 × 109 bp)8.6%
  • Blocks of non-B6–non-DBA DNA >3 Mb in length and containing at least one BKS-unique SNP. Blocks generally contain no uninterrupted internal runs of B6 or DBA alleles >3 Mb.

  • *

    * Exceptions occur for some blocks where terminal SNP encloses a slightly larger block or in the case of a large gap in informative markers (*).

  • Contains no BKS-unique SNPs. SNP Identifier uses the standard “rs” (refSNP) prefix for SNP accession numbers from the public database and “mCV” (mouse Celera Variant) for SNPs developed by Celera.