TABLE 1

Characteristics of primers for real-time RT-PCR

Primer (name)Accession number*Primer pair sequence (sense/antisense)Location (nucleotide)Fragment size (bp)
HLA-ANM_002116.55′-TGTCCCTCACAGCTTGTAAAG-3′1073–1093150
5′-ATTATGCCTACACGAACACAG-3′1222–1202
HLA-BNM_005514.55′-CATGACCAGTACGCCTACGAC-3′409–429202
5′-CCAGCTTGTCCTTCCCGTTCT-3′610–590
HLA-DQB1NM_002123.25′-GTCATCTCCTTTCATCCCCA-3′979–998121
5′-AAACAGAAACCCCTTGGG-3′1099–1082
CCL19NM_006274.25′-AGCAGTTAACCTATGACCGTGC-3′427–448245
5′-CCAGGCGGCTTTATTGGTAGC-3′671–651
C3NM_000064.25′-ACGAATGCCAAGACGAAGAG-3′4966–4986126
5′-CTGAAGCTTTATCTGGAGTGGG-3′5091–5070
TNFSF10NM_003810.25′-GATCAAGACCATAGTGACCAA-3′1483–1503167
5′-TGGCATGATCTCACCACAC-3′1649–1631
18SNR_003286.15′-GTAACCCGTTGAACCCCATTC-3′1577–1597153
5′-CCATCCAATCGGTAGTAGCG-3′1729–1710
  • * Genebank accession number for the sequences used in designing the primers.