Table 1

Alignments and core predictions of length variants of DQ6-eluted peptides

HLA-DQ6
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AGHTSGAAMWPGTDVK
YPFDFQGARIITGQEEG
GPGAAVVAGAVVGTLVG
AVPVMVPAQSQAGSLV
DNVLMSGVKNNVGRGIN
SQLIMQAEAEAASVR
ELQEPAELVESDG
TDQVQAEAKESGPT
TGETYTCVVAHEALPNR
GALTSGVHTFPAVLQ
TDTDQACSIRDPNSG
KSGNTASLTISGLQ
VLHVWGVTTEKSKE
EPAEVTATVLASRDD
DSNEFSVIADPRG
  • Overview of peptide alignments and binding core identifications of length variants eluted from DQ6-expressing EBV-BLCLs. Anchors are in boldface type.