PCOS SNPs used to construct the main instrument variable in Europeans
Chr:position | SNP | Effect allele | Other allele | EAF | β | SE | Nearest gene | P | F statistic |
---|---|---|---|---|---|---|---|---|---|
2:43561780 | rs7563201 | A | G | 0.451 | −0.108 | 0.017 | THADA | 3.68E−10 | 39.50 |
2:213391766 | rs2178575 | A | G | 0.151 | 0.166 | 0.022 | ERBB4 | 3.34E−14 | 57.66 |
5:131813204 | rs13164856 | T | C | 0.729 | 0.124 | 0.019 | IRF1/RAD50 | 1.45E−10 | 40.95 |
8:11623889 | rs804279 | A | T | 0.262 | 0.128 | 0.018 | GATA4/NEIL2 | 3.76E−12 | 48.09 |
9:5440589 | rs10739076 | A | C | 0.308 | 0.110 | 0.020 | PLGRKT | 2.51E−08 | 31.01 |
9:97723266 | rs7864171 | A | G | 0.428 | −0.093 | 0.017 | C9orf3 | 2.95E−08 | 30.84 |
9:126619233 | rs9696009 | A | G | 0.068 | 0.202 | 0.031 | DENND1A | 7.96E−11 | 42.19 |
11:30226356 | rs11031005 | T | C | 0.854 | −0.159 | 0.022 | ARL14EP/FSHB | 8.66E−13 | 51.03 |
11:102043240 | rs11225154 | A | G | 0.094 | 0.179 | 0.027 | YAP1 | 5.44E−11 | 43.16 |
11:113949232 | rs1784692 | T | C | 0.824 | 0.144 | 0.023 | ZBTB16 | 1.88E−10 | 40.49 |
12:56477694 | rs2271194 | A | T | 0.416 | 0.097 | 0.017 | ERBB3/RAB5B | 4.57E−09 | 34.22 |
12:75941042 | rs1795379 | T | C | 0.240 | −0.117 | 0.020 | KRR1 | 1.81E−09 | 36.25 |
16:52375777 | rs8043701 | A | T | 0.815 | −0.127 | 0.021 | TOX3 | 9.61E−10 | 37.46 |
2:49247832 | rs2349415 | T | C | 0.343 | 0.076 | 0.017 | FSHR | 9.59E−06 | 19.65 |
Chr, chromosome; EAF, effect allele frequency.